bunwarpj
Class Param

java.lang.Object
  bunwarpj.Param

public class Param
extends java.lang.Object

This class stores the parameters to apply the consistent elastic registration and it is independent of the primary GUI.

Field Summary

double	consistencyWeight consistency weight
double	curlWeight curl weight
double	divWeight divergence weight
double	imageWeight image similarity weight
int	img_subsamp_fact image subsampling factor (from 0 to 7, representing 2^0=1 to 2^7 = 128)
double	landmarkWeight landmark weight
int	max_scale_deformation maximum scale deformation (0 - Very Coarse, 1 - Coarse, 2 - Fine, 3 - Very Fine, 4 - Super Fine)
int	min_scale_deformation minimum scale deformation (0 - Very Coarse, 1 - Coarse, 2 - Fine, 3 - Very Fine)
int	mode mode accuracy mode (0 - Fast, 1 - Accurate, 2 - Mono)
double	stopThreshold stopping threshold

Constructor Summary

Param()
Empty constructor

Param(int mode, int img_subsamp_fact, int min_scale_deformation, int max_scale_deformation, double divWeight, double curlWeight, double landmarkWeight, double imageWeight, double consistencyWeight, double stopThreshold)
Full constructor

Method Summary

boolean

showDialog() Show modal dialog to collect bUnwarpJ parameters

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

mode

public int mode

mode accuracy mode (0 - Fast, 1 - Accurate, 2 - Mono)

img_subsamp_fact

public int img_subsamp_fact

image subsampling factor (from 0 to 7, representing 2^0=1 to 2^7 = 128)

min_scale_deformation

public int min_scale_deformation

minimum scale deformation (0 - Very Coarse, 1 - Coarse, 2 - Fine, 3 - Very Fine)

max_scale_deformation

public int max_scale_deformation

maximum scale deformation (0 - Very Coarse, 1 - Coarse, 2 - Fine, 3 - Very Fine, 4 - Super Fine)

divWeight

public double divWeight

divergence weight

curlWeight

public double curlWeight

curl weight

landmarkWeight

public double landmarkWeight

landmark weight

imageWeight

public double imageWeight

image similarity weight

consistencyWeight

public double consistencyWeight

consistency weight

stopThreshold

public double stopThreshold

stopping threshold

Constructor Detail

Param

public Param()

Empty constructor

Param

public Param(int mode,
             int img_subsamp_fact,
             int min_scale_deformation,
             int max_scale_deformation,
             double divWeight,
             double curlWeight,
             double landmarkWeight,
             double imageWeight,
             double consistencyWeight,
             double stopThreshold)

Full constructor

Parameters:

mode - mode accuracy mode (0 - Fast, 1 - Accurate, 2 - Mono)

img_subsamp_fact - image subsampling factor (from 0 to 7, representing 2^0=1 to 2^7 = 128)

min_scale_deformation - minimum scale deformation (0 - Very Coarse, 1 - Coarse, 2 - Fine, 3 - Very Fine)

max_scale_deformation - maximum scale deformation (0 - Very Coarse, 1 - Coarse, 2 - Fine, 3 - Very Fine, 4 - Super Fine)

divWeight - divergence weight

curlWeight - curl weight

landmarkWeight - landmark weight

imageWeight - image similarity weight

consistencyWeight - consistency weight

stopThreshold - stopping threshold

Method Detail

showDialog

public boolean showDialog()

Show modal dialog to collect bUnwarpJ parameters

Returns:

false if the dialog was canceled or true if it was not.