bunwarpj
Class MainDialog

java.lang.Object
  java.awt.Component
      java.awt.Container
          java.awt.Window
              java.awt.Dialog
                  ij.gui.GenericDialog
                      bunwarpj.MainDialog

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.AdjustmentListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.KeyListener, java.awt.event.TextListener, java.awt.event.WindowListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible

public class MainDialog
extends ij.gui.GenericDialog

Class to create the dialog for bUnwarpJ. It extends GenericDialog to allow the user interacting with the other windows.

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class java.awt.Dialog

java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType

Nested classes/interfaces inherited from class java.awt.Window

java.awt.Window.AccessibleAWTWindow

Nested classes/interfaces inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

static int	ACCURATE_MODE accurate mode constant
private boolean	bIsReverse consistency flag (if false, unidirectional registration is done)
private boolean	bMacro macro flag
private boolean	clearMask Boolean for clearing mask
private double	consistencyWeight consistency weight
private java.awt.TextField	consistencyWeightTextField consistency weight text field
private double	curlWeight curl weight
private double	divWeight divergence weight
static int	FAST_MODE fast mode constant
private boolean	finalActionLaunched flag to see if the finalAction was launched
private ij.ImagePlus[]	imageList List of available images in ImageJ
private int	imagePyramidDepth maximum depth for the image pyramid
private double	imageWeight image similarity weight
private double	landmarkWeight landmarks weight
private int	max_scale_deformation maximum scale deformation
private int	maxImageSubsamplingFactor image subsampling factor at highest resolution level
private java.awt.Choice	maxScaleChoice maximum scale choice
private int	min_scale_deformation minimum scale deformation
private int	min_scale_image minimum image scale
private java.awt.Choice	minScaleChoice minimum scale choice
private int	mode mode ("Accurate" by default)
private java.awt.Choice	modeChoice accurate mode choice
static int	MONO_MODE unidirectional ("mono") mode constant
private ij.process.ImageProcessor	originalSourceIP initial source image processor
private ij.process.ImageProcessor	originalTargetIP initial target image processor
private ij.gui.Roi	previousSourceRoi region of interest of the source image before calling the plugin
private ij.gui.Roi	previousTargetRoi region of interest of the target image before calling the plugin
private java.awt.Scrollbar	resamplingSlider resampling scroll bar
private java.awt.TextField	resamplingTextField resampling text field
private boolean	richOutput flag for rich output (verbose option)
private boolean	saveTransformation flag for save transformation option
private BSplineModel	source Model for source image
private double[][]	sourceAffineMatrix Initial affine matrix for the source image
private java.awt.Choice	sourceChoice source image choice
private int	sourceChoiceIndex index of the source choice
private ij.gui.ImageCanvas	sourceIc Canvas of the source image
private ij.ImagePlus	sourceImp Image representation for source image
private Mask	sourceMsk Mask for source image
private PointHandler	sourcePh Point handlers for the landmarks in the source image
private boolean	stopRegistration flag to stop the registration
private double	stopThreshold stopping threshold
private BSplineModel	target Model for target image
private double[][]	targetAffineMatrix Initial affine matrix for the target image
private java.awt.Choice	targetChoice target image choice
private int	targetChoiceIndex index of the target choice
private ij.gui.ImageCanvas	targetIc Canvas of the target image
private ij.ImagePlus	targetImp Image representation for target image
private Mask	targetMsk Mask for target image
private PointHandler	targetPh Point handlers for the landmarks in the target image
private PointToolbar	tb Toolbar handler

Fields inherited from class ij.gui.GenericDialog

checkbox, choice, defaultText, defaultValues, MAX_SLIDERS, numberField, slider, stringField, textArea1, textArea2, theLabel

Fields inherited from class java.awt.Dialog

DEFAULT_MODALITY_TYPE

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

MainDialog(java.awt.Frame parentWindow, ij.ImagePlus[] imageList, int mode, int maxImageSubsamplingFactor, int min_scale_deformation, int max_scale_deformation, double divWeight, double curlWeight, double landmarkWeight, double imageWeight, double consistencyWeight, double stopThreshold, boolean richOutput, boolean saveTransformation)
Create a new instance of MainDialog.

Method Summary

void	actionPerformed(java.awt.event.ActionEvent ae) Actions to be taken during the dialog.
private void	addImageList(java.awt.Choice choice) Add the image list to the list of choices.
void	applyRawTransformationToSource(double[][] transformation_x, double[][] transformation_y) Apply a raw transformation to the source image.
void	applyTransformationToSource(int intervals, double[][] cx, double[][] cy) Apply the transformation defined by the spline coefficients to the source image.
private void	cancelSource() Close all the variables related to the source image.
private void	cancelTarget() Close all the variables related to the target image.
private void	computeImagePyramidDepth() Compute the depth of the image resolution pyramid.
private void	createSourceImage(boolean bIsReverse) Create the source image, i.e.
private void	createTargetImage() Create target image.
void	freeMemory() Free the memory used in the program.
ij.process.ImageProcessor	getOriginalSourceIP() Get original source image process.
ij.process.ImageProcessor	getOriginalTargetIP() Get original target image process.
BSplineModel	getSource() Get source image model.
double[][]	getSourceAffineMatrix() Get the source initial affine matrix.
Mask	getSourceMask() Get source Mask.
Mask	getSourceMsk() Get source point handler.
PointHandler	getSourcePh() Get source point handler.
BSplineModel	getTarget() Get target image model.
double[][]	getTargetAffineMatrix() Get the target initial affine matrix.
Mask	getTargetMask() Get target Mask.
Mask	getTargetMsk() Get target point handler.
PointHandler	getTargetPh() Get target point handler.
void	grayImage(PointHandler ph) Method to color the area of the mask.
boolean	isClearMaskSet() Get clearMask flag.
boolean	isFinalActionLaunched() Get finalActionLaunched flag.
boolean	isMacroCall() Get the macro flag
boolean	isSaveTransformationSet() Get saveTransformation flag.
boolean	isStopRegistrationSet() Get stopRegistration flag.
void	itemStateChanged(java.awt.event.ItemEvent e) Action to be taken when choices change.
void	joinThreads() Join the threads for the source and target images.
private void	loadPointRoiAsLandmarks() Load point rois in the source and target images as landmarks.
private void	permuteImages(boolean bIsReverse) Permute the pointer for the target and source images.
private void	removePoints() Remove the points from the points handlers of the source and target image.
void	repaintToolbar() Repaint toolbar.
private void	restartModelThreads(boolean bIsReverse) Re-launch the threads for the image models of the source and target.
void	restoreAll() Restore the initial conditions.
void	setClearMask(boolean val) Set the clearMask flag.
void	setFinalActionLaunched(boolean b) Set final action launched flag.
void	setSaveTransformation(boolean b) Set saveTransformation flag.
private void	setSecondaryPointHandlers() Set the secondary point handlers.
void	setSourceAffineMatrix(double[][] affineMatrix) Set source intial affine matrix.
void	setSourceMask(java.lang.String sFileName) Set source Mask.
void	setStopRegistration() Set the stopRegistration flag to true.
void	setToolbarAllUp() Set toolbar tools all up.
void	showDialog() Show main bUnwarpJ dialog
private void	stopSourceThread() Stop the thread of the source image.
private void	stopTargetThread() Stop the thread of the target image.
void	ungrayImage(PointAction pa) Ungray image.
void	windowClosing(java.awt.event.WindowEvent e) Actions to be taken when closing the dialog.

Methods inherited from class ij.gui.GenericDialog

addCheckbox, addCheckboxGroup, addChoice, addDialogListener, addHelp, addMessage, addNumericField, addNumericField, addPanel, addPanel, addPreviewCheckbox, addPreviewCheckbox, addSlider, addStringField, addStringField, addTextAreas, adjustmentValueChanged, centerDialog, enableYesNoCancel, enableYesNoCancel, focusGained, focusLost, getButtons, getCheckboxes, getChoices, getErrorMessage, getInsets, getMessage, getNextBoolean, getNextChoice, getNextChoiceIndex, getNextNumber, getNextString, getNextText, getNumericFields, getPreviewCheckbox, getSliders, getStringFields, getTextArea1, getTextArea2, getValue, hideCancelButton, invalidNumber, keyPressed, keyReleased, keyTyped, paint, previewRunning, setEchoChar, setInsets, setOKLabel, setup, textValueChanged, wasCanceled, wasOKed, windowActivated, windowClosed, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.awt.Dialog

addNotify, getAccessibleContext, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, paramString, setModal, setModalityType, setResizable, setTitle, setUndecorated, setVisible, show, toBack

Methods inherited from class java.awt.Window

addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getGraphicsConfiguration, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOwnedWindows, getOwner, getOwnerlessWindows, getToolkit, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isShowing, pack, postEvent, processEvent, processWindowEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, toFront

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, setLayout, transferFocusBackward, transferFocusDownCycle, update, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphics, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isOpaque, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resize, resize, setBackground, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setLocation, setLocation, setMaximumSize, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

FAST_MODE

public static int FAST_MODE

fast mode constant

ACCURATE_MODE

public static int ACCURATE_MODE

accurate mode constant

MONO_MODE

public static int MONO_MODE

unidirectional ("mono") mode constant

imageList

private ij.ImagePlus[] imageList

List of available images in ImageJ

sourceIc

private ij.gui.ImageCanvas sourceIc

Canvas of the source image

targetIc

private ij.gui.ImageCanvas targetIc

Canvas of the target image

sourceImp

private ij.ImagePlus sourceImp

Image representation for source image

targetImp

private ij.ImagePlus targetImp

Image representation for target image

originalSourceIP

private ij.process.ImageProcessor originalSourceIP

initial source image processor

originalTargetIP

private ij.process.ImageProcessor originalTargetIP

initial target image processor

source

private BSplineModel source

Model for source image

target

private BSplineModel target

Model for target image

sourceMsk

private Mask sourceMsk

Mask for source image

targetMsk

private Mask targetMsk

Mask for target image

sourceAffineMatrix

private double[][] sourceAffineMatrix

Initial affine matrix for the source image

targetAffineMatrix

private double[][] targetAffineMatrix

Initial affine matrix for the target image

sourcePh

private PointHandler sourcePh

Point handlers for the landmarks in the source image

targetPh

private PointHandler targetPh

Point handlers for the landmarks in the target image

clearMask

private boolean clearMask

Boolean for clearing mask

tb

private PointToolbar tb

Toolbar handler

finalActionLaunched

private boolean finalActionLaunched

flag to see if the finalAction was launched

stopRegistration

private boolean stopRegistration

flag to stop the registration

sourceChoiceIndex

private int sourceChoiceIndex

index of the source choice

targetChoiceIndex

private int targetChoiceIndex

index of the target choice

min_scale_deformation

private int min_scale_deformation

minimum scale deformation

max_scale_deformation

private int max_scale_deformation

maximum scale deformation

mode

private int mode

mode ("Accurate" by default)

maxImageSubsamplingFactor

private int maxImageSubsamplingFactor

image subsampling factor at highest resolution level

divWeight

private double divWeight

divergence weight

curlWeight

private double curlWeight

curl weight

landmarkWeight

private double landmarkWeight

landmarks weight

imageWeight

private double imageWeight

image similarity weight

consistencyWeight

private double consistencyWeight

consistency weight

richOutput

private boolean richOutput

flag for rich output (verbose option)

saveTransformation

private boolean saveTransformation

flag for save transformation option

min_scale_image

private int min_scale_image

minimum image scale

imagePyramidDepth

private int imagePyramidDepth

maximum depth for the image pyramid

stopThreshold

private double stopThreshold

stopping threshold

bIsReverse

private boolean bIsReverse

consistency flag (if false, unidirectional registration is done)

bMacro

private boolean bMacro

macro flag

previousSourceRoi

private ij.gui.Roi previousSourceRoi

region of interest of the source image before calling the plugin

previousTargetRoi

private ij.gui.Roi previousTargetRoi

region of interest of the target image before calling the plugin

sourceChoice

private java.awt.Choice sourceChoice

source image choice

targetChoice

private java.awt.Choice targetChoice

target image choice

minScaleChoice

private java.awt.Choice minScaleChoice

minimum scale choice

maxScaleChoice

private java.awt.Choice maxScaleChoice

maximum scale choice

modeChoice

private java.awt.Choice modeChoice

accurate mode choice

resamplingTextField

private java.awt.TextField resamplingTextField

resampling text field

resamplingSlider

private java.awt.Scrollbar resamplingSlider

resampling scroll bar

consistencyWeightTextField

private java.awt.TextField consistencyWeightTextField

consistency weight text field

Constructor Detail

MainDialog

public MainDialog(java.awt.Frame parentWindow,
                  ij.ImagePlus[] imageList,
                  int mode,
                  int maxImageSubsamplingFactor,
                  int min_scale_deformation,
                  int max_scale_deformation,
                  double divWeight,
                  double curlWeight,
                  double landmarkWeight,
                  double imageWeight,
                  double consistencyWeight,
                  double stopThreshold,
                  boolean richOutput,
                  boolean saveTransformation)

Create a new instance of MainDialog.

Parameters:

parentWindow - pointer to the parent window

imageList - list of images from ImageJ

mode - default registration mode (0 = Fast, 1 = Accurate, 2 = Mono)

maxImageSubsamplingFactor - subsampling factor at highest resolution level

min_scale_deformation - default minimum scale deformation value

max_scale_deformation - default maximum scale deformation value

divWeight - default divergence weight

curlWeight - default curl weight

landmarkWeight - default landmarks weight

imageWeight - default image similarity weight

consistencyWeight - default consistency weight

stopThreshold - default stopping threshold

richOutput - default verbose flag

saveTransformation - default save transformations flag

Method Detail

setSourceMask

public void setSourceMask(java.lang.String sFileName)

Set source Mask.

Parameters:

sFileName - source mask file name

setSourceAffineMatrix

public void setSourceAffineMatrix(double[][] affineMatrix)

Set source intial affine matrix.

Parameters:

affineMatrix - initial affine matrix

getSourceMask

public Mask getSourceMask()

Get source Mask.

getTargetMask

public Mask getTargetMask()

Get target Mask.

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent ae)

Actions to be taken during the dialog.

Specified by:

actionPerformed in interface java.awt.event.ActionListener

Overrides:

actionPerformed in class ij.gui.GenericDialog

windowClosing

public void windowClosing(java.awt.event.WindowEvent e)

Actions to be taken when closing the dialog.

Specified by:

windowClosing in interface java.awt.event.WindowListener

Overrides:

windowClosing in class ij.gui.GenericDialog

showDialog

public void showDialog()

Show main bUnwarpJ dialog

Overrides:

showDialog in class ij.gui.GenericDialog

itemStateChanged

public void itemStateChanged(java.awt.event.ItemEvent e)

Action to be taken when choices change.

Specified by:

itemStateChanged in interface java.awt.event.ItemListener

Overrides:

itemStateChanged in class ij.gui.GenericDialog

Parameters:

e - item event

applyTransformationToSource

public void applyTransformationToSource(int intervals,
                                        double[][] cx,
                                        double[][] cy)

Apply the transformation defined by the spline coefficients to the source image.

Parameters:

intervals - intervals in the deformation

cx - b-spline X- coefficients

cy - b-spline Y- coefficients

applyRawTransformationToSource

public void applyRawTransformationToSource(double[][] transformation_x,
                                           double[][] transformation_y)

Apply a raw transformation to the source image.

Parameters:

transformation_x - X- mapping

transformation_y - Y- mapping

freeMemory

public void freeMemory()

Free the memory used in the program.

grayImage

public void grayImage(PointHandler ph)

Method to color the area of the mask.

Parameters:

ph - image point handler

isFinalActionLaunched

public boolean isFinalActionLaunched()

Get finalActionLaunched flag.

isClearMaskSet

public boolean isClearMaskSet()

Get clearMask flag.

isSaveTransformationSet

public boolean isSaveTransformationSet()

Get saveTransformation flag.

setSaveTransformation

public void setSaveTransformation(boolean b)

Set saveTransformation flag.

isStopRegistrationSet

public boolean isStopRegistrationSet()

Get stopRegistration flag.

joinThreads

public void joinThreads()

Join the threads for the source and target images.

restoreAll

public void restoreAll()

Restore the initial conditions.

setClearMask

public void setClearMask(boolean val)

Set the clearMask flag.

setStopRegistration

public void setStopRegistration()

Set the stopRegistration flag to true.

getSourceAffineMatrix

public double[][] getSourceAffineMatrix()

Get the source initial affine matrix.

getTargetAffineMatrix

public double[][] getTargetAffineMatrix()

Get the target initial affine matrix.

ungrayImage

public void ungrayImage(PointAction pa)

Ungray image. It restores the original version of the image (without mask).

Parameters:

pa - point action pointer

addImageList

private void addImageList(java.awt.Choice choice)

Add the image list to the list of choices.

Parameters:

choice - list of choices

cancelSource

private void cancelSource()

Close all the variables related to the source image.

cancelTarget

private void cancelTarget()

Close all the variables related to the target image.

computeImagePyramidDepth

private void computeImagePyramidDepth()

Compute the depth of the image resolution pyramid.

createSourceImage

private void createSourceImage(boolean bIsReverse)

Create the source image, i.e. initialize the B-spline model for the source image. The resolution pyramid is not started here, but in startPyramids.

Parameters:

bIsReverse - determines the transformation direction (source-target=TRUE or target-source=FALSE)

createTargetImage

private void createTargetImage()

Create target image.

loadPointRoiAsLandmarks

private void loadPointRoiAsLandmarks()

Load point rois in the source and target images as landmarks.

permuteImages

private void permuteImages(boolean bIsReverse)

Permute the pointer for the target and source images.

Parameters:

bIsReverse - determines the transformation direction (source-target=TRUE or target-source=FALSE)

removePoints

private void removePoints()

Remove the points from the points handlers of the source and target image.

restartModelThreads

private void restartModelThreads(boolean bIsReverse)

Re-launch the threads for the image models of the source and target.

Parameters:

bIsReverse - boolean variable to indicate the use of consistency

setSecondaryPointHandlers

private void setSecondaryPointHandlers()

Set the secondary point handlers.

stopSourceThread

private void stopSourceThread()

Stop the thread of the source image.

stopTargetThread

private void stopTargetThread()

Stop the thread of the target image.

getSourcePh

public PointHandler getSourcePh()

Get source point handler.

getTargetPh

public PointHandler getTargetPh()

Get target point handler.

getSourceMsk

public Mask getSourceMsk()

Get source point handler.

getTargetMsk

public Mask getTargetMsk()

Get target point handler.

setFinalActionLaunched

public void setFinalActionLaunched(boolean b)

Set final action launched flag.

setToolbarAllUp

public void setToolbarAllUp()

Set toolbar tools all up.

repaintToolbar

public void repaintToolbar()

Repaint toolbar.

getTarget

public BSplineModel getTarget()

Get target image model.

getOriginalSourceIP

public ij.process.ImageProcessor getOriginalSourceIP()

Get original source image process.

getOriginalTargetIP

public ij.process.ImageProcessor getOriginalTargetIP()

Get original target image process.

getSource

public BSplineModel getSource()

Get source image model.

isMacroCall

public boolean isMacroCall()

Get the macro flag

Returns:

macro flag